Horticultural & Management


Development of Effective Guava-based Repellent to Control Asian Citrus Psyllid and Mitigate Huanglongbing Disease Incidence

Report Date: 04/19/2012   Project: 217

Development of Effective Guava-based Repellent to Control Asian Citrus Psyllid and Mitigate Huanglongbing Disease Incidence

Report Date: 04/19/2012
Project: 217
Category: ACP Vector
Author: Lukasz Stelinski
Sponsor: Citrus Research and Development Foundation

In this research, we have been developing a repellent formulation for Asian citrus psyllid (ACP). A DMDS-based SPLAT formulation has been developed. It is currently formulated and produced by ISCA technologies. Our recent results have produced inconsistent results; however, there have been cases where the formulation has effectively reduced psyllid populations both in Florida and in trials in another state. In the final year of the project, we have tested new active ingredients that may be more effective than DMDS for several reasons. First, these newly identified active ingredients are less noxious than DMDS and simply do not smell as bad to humans. This makes them much easier to work with. Also, these chemicals are less phytotoxic and easier to formulate. Therefore, these new formulations may not have the drawbacks that are associated with DMDS-SPLAT. In this previous quarter, we have been working to evaluate these new formulations and we have determined that two of the newly identified active ingredients are effective in repelling psyllids when deployed in SPLAT. We are currently finishing up these tests to hopefully determine whether a more practical SPLAT-based repellent formulation can be developed than our current DMDS-based standard.



How does infection of Asian citrus psylid with Candidatus Liberibacter asiaticus affect the behavioral response of the vector to healthy versus diseased citrus trees?

Report Date: 04/19/2012   Project: 439

How does infection of Asian citrus psylid with Candidatus Liberibacter asiaticus affect the behavioral response of the vector to healthy versus diseased citrus trees?

Report Date: 04/19/2012
Project: 439
Category: Horticultural & Management
Author: Lukasz Stelinski
Sponsor: Citrus Research and Development Foundation

Our objective was to determine how psyllid behavior is affected by Las-infection of citrus. In previous experiments we have determined that ACP adults initially prefer to settle on Las-infected plants. This attraction to Las-infected plants appears to be dependent upon the plant release of the volatile chemical, methyl salicylate. Based on published data, it is known that Las-infected plants have nutrient deficiencies. Therefore, we hypothesized that while the Las-infected plants are initially attractive to psyllids, after prolonged feeding the psyllids experience imbalanced nutrition and choose to seek a better host. To examine this hypothesis we planned to determine how psyllids settle on plants with known nutrient deficiencies. Our previous experimental design was limited to settling behavior of psyllids on nutrient deficient and healthy plants. To obtain more robust conclusions, we have modified our experimental design to incorporate HLB-infected plants. In these experiments we plan to test psyllid settling preference in several scenarios: 1. Healthy vs. Nutrient Deficient Citrus 2. Healthy vs. HLB infected Citrus 3. Healthy vs. Nutrient Deficient Citrus + ‘HLB infected plant odor’ (HLB odor) 4. Healthy vs. Healthy + HLB odor If psyllids initially settle on HLB infected plants because of attractive odors and subsequently move due to the poor nutrient quality of the host, we expect the following results: In scenario 1, psyllids should settle and stay on healthy plants. In scenario 2, psyllids should initially settle on HLB-infected plants and then move to healthy plants (this has been previously shown in experiments). In scenario 3, psyllids should settle on nutrient deficient plants with HLB odor and then move to healthy plants. In the last scenario psyllids should settle and stay on healthy plants with HLB odor. In the last quarter, we have been successful in making nutrient deficient uninfected plants to use in these experiments. We sent leaf tissue samples from ten healthy, ten unfertilized (Nutrient Deficient), and ten HLB-infected Valencia plants to a private lab for nutrient evaluation. The results show that our unfertilized plants contain significantly less nitrogen, potassium, magnesium, calcium, boron, zinc, manganese, and iron when compared to Healthy plants. There were no significant differences in sulfur, phosphorus, or copper content between unfertilized and control plants. The HLB-infected plants have been fertilized regularly and are contain levels of nutrients that are not significantly less than healthy plants with the exception of zinc. We are in the process of assessing the volatile profile of the three plant types: Healthy, Nutrient Deficient, and HLB infected citrus. In preliminary trials we found that our existing volatile collection bell jars were too small to use on the plants selected, resulting in physical damage to the plants during handling. We have since ordered larger bell jars and are prepping for volatile collections. Upon analysis of Healthy, Nutrient Deficient and HLB infected plants, we will determine the characteristic components of HLB infected plant odor. These odors will then be applied to the plants according to the design outlined above.



Genetic Resistance to Citrus Canker conferred by the Pepper Bs3 Gene

Report Date: 04/17/2012   Project: 102

Genetic Resistance to Citrus Canker conferred by the Pepper Bs3 Gene

Report Date: 04/17/2012
Project: 102
Category: Horticultural & Management
Author: Diana Horvath
Sponsor: Citrus Research and Development Foundation

Our progress for the current quarter is as follows: 1. Transgenic Duncan grapefruit lines expressing avrGf1 driven by the Bs3- PIP14 box promoter are currently being tested for resistance by spray inoculating X. citri subsp citri 306 at 10^8 cfu per ml suspended in sterile tap water on young citrus leaves. Resistance confirmed by transgenic lines will be assessed by evaluating canker lesions between transgenic and non-transgenic control plants. 2. Compared to AvrGf1, the type 3 effector AvrGf2, identified from X. fuscans subsp aurantifolii strain C, seems to provoke a faster hypersensitive reaction on Duncan grapefruit. The avrGf2 coding sequence was fused with the Bs3- PIP14 box promoter into the pK7FWG2 binary vector and transformed into A. tumefaciens strain Agl-1. In planta transient expression in Duncan grapefruit was assessed for induction by X. citri subsp citri 306 TALEs using the pathogen inducible promoter (Bs3- PIP14 box):avrGf2 construct for citrus canker resistance. Upon activation of the construct by Xcc TALEs, the expressed AvrGf2 elicited a resistance response that was faster and more effective than that of a Bs3-PIP14 promoter construct driving AvrGf1. 3. Transgenic Duncan grapefruit carrying the AvrGf2 construct are in the development pipeline to produce stable transformants. Transfomation was performed on 2,049 grapefruit epicotyl segments. 4. Germination and epicotyl transformation experiments with Duncan grapefruit are continuing. Molecular characterization involving PCR is ongoing and used to confirm transgenic lines from the putative transgenic plants regenerated. To date, a total of 190 putative transgenic plants have been screened and 23%, 20% and 6% of the plants tested positive for the Bs3 promoter, nptII and the avrGf1 genes, respectively.



Transmission of the emerging citrus pathogen cytoplasmic citrus leprosis virus by endemic mites

Report Date: 04/16/2012   Project: 405

Transmission of the emerging citrus pathogen cytoplasmic citrus leprosis virus by endemic mites

Report Date: 04/16/2012
Project: 405
Category: Horticultural & Management
Author: Ronald Brlansky
Sponsor: Citrus Research and Development Foundation

Cytoplasmic citrus leprosis infected samples previously sent from our cooperator in Colombia to quarantine facilities at the USDA, APHIS, PPQ, CPHST, Beltsville, MD. continued to be negative in PCR and antibody tests for cytoplasmic citrus leprosis virus. Additional sets of samples were sent during this funding period. All samples were prepared for electron microscopy to verify the PCR results. Viral particles similar to those previously published for cytoplasmic citrus leprosis were discovered in all the samples. Sizes and locations of the virions were verified. Sequencing was done and a new virus was identified by our lab in conjunction with another funded project. New primers are now available for detection and we plan to perform mites transmissions on both types of the virus at the USDA, ARS, FDWSRU in Fort Detrick. Mr.Leon in Colombia as earlier reported did mite transmission experiments with the previously PCR negative isolates from Colombia. With our new primers we have found that he has transmitted this new virus with Brevipalpus mites from Colombia. Symptoms of the new virus are identical to citrus leprosis.



Infection traits and growth of "Candidatus Liberibacter asiaticus" inside microfluidic chambers

Report Date: 04/16/2012   Project: 307

Infection traits and growth of "Candidatus Liberibacter asiaticus" inside microfluidic chambers

Report Date: 04/16/2012
Project: 307
Category: Horticultural & Management

All data analyses and writing for this research was completed, and a publication entitled “Viability of ‘Candidatus Liberibacter asiaticus’ prolonged by addition of citrus juice to culture medium” has been submitted to a peer-reviewed journal and is currently under review. Data finalized and discussed in this publication include: qPCR data from total and viable LAS cells over time in different culture media and next-generation sequencing data of the microbial communities associated with LAS in cultures, among several other aspects of the research conducted for the purpose of this grant. This data was also presented at the 3rd International Conference on Huanglongbing, and comments from other researchers in this field were incorporated into the manuscript. While this publication does not provide a defined method for the culture of LAS, it does provide many useful clues for prolonging LAS viability which we expect to be instrumental in future development of a culture medium via collaborations among the scientific community.



Transmission of the emerging citrus pathogen cytoplasmic citrus leprosis virus by endemic mites

Report Date: 04/15/2012   Project: 405

Transmission of the emerging citrus pathogen cytoplasmic citrus leprosis virus by endemic mites

Report Date: 04/15/2012
Project: 405
Category: Horticultural & Management
Author: Ronald Brlansky
Sponsor: Citrus Research and Development Foundation

Cytoplasmic citrus leprosis infected samples were sent from our cooperator in Colombia to quarantine facilities at the USDA, APHIS, PPQ, CPHST, Beltsville, MD. Five sets of samples were sent during this funding period and again samples did not arrive in very good condition due to delays in shipment. PCR was done on all samples and all samples were prepared for electron microscopy to verify the PCR results. Viral particles as previously published for cytoplasmic citrus leprosis were discovered in all the samples. However the PCR was not positive for cytoplasmic citrus leprosis. Since the samples were not positive samples for mite transmissions were not sent to the quarantine lab at the USDA, ARS, FDWSRU in Ft. Detrick for endemic mite transmission tests. Mr.Leon in Colombia as previously reported did transmission experiments with the mites and these PCR negative isolates from Colombia. Funding for Mr. Leon’s work was received and he continues to do transmission tests. PCR positive samples were successfully shipped from Mexico and Panama to quarantine in Maryland as controls for PCR tests. In January the first experiments were planned with with the endemic mites from Florida and PCR positive leprosis samples from Colombia. However none of the samples were PCR positive. We began sequencing funded by another grant to find out why the samples were not PCR positive for cytoplasmic leprosis compared to samples from Mexico and Panama.



Transferring disease resistance technology from a model system to citrus

Report Date: 04/15/2012   Project: NAS 149

Transferring disease resistance technology from a model system to citrus

Report Date: 04/15/2012
Project: NAS 149
Category: Horticultural & Management
Author: Zhonglin Mou
Sponsor: Citrus Research and Development Foundation

This is a 4-year project with 2 main objectives: (1) Over-express the Arabidopsis MAP kinase kinase 7 (AtMKK7) gene in citrus to increase disease resistance (Transgenic approach). (2) Select for citrus mutants with increased disease resistance (Non-transgenic approach). For the transgenic approach proposed in objective 1, besides transforming the Arabidopsis MKK7 (AtMKK7) gene into citrus, we are making transgenic citrus plants overexpressing SA biosynthesis genes. We expect that citrus transgenic plants overproducing SA would have increased resistance to citrus canker. Although exogenous application of SA does not increase resistance to citrus greening, increasing endogenous SA levels may have different effect. Transgenic citrus plants expressing the Arabidopsis MKK7 (AtMKK7) gene are currently under canker resistance test. We have propagated these plants for citrus greening test. We are trying to generate citrus transgenic plants overexpressing several other Arabidopsis disease resistance genes including ELP3 and ELP4. The mutant screen proposed in objective 2 has been continued. More gamma ray-irradiated Ray Ruby grapefruit seeds have been gamma ray irradiated. Part of the seeds will be plated into large glass Petri dishes as well as Magenta boxes containing water agar. Shoots formed on the seeds previously plated will be transferred onto selective medium containing 0.2 mM of sodium iodoacetate. Some shoots formed on these gamma irradiated seeds have been screened again on the selective medium. Part of the seeds will be directly sown into soil, and seedlings from these seeds will be test for greening resistance. We would like to test whether a direct genetic screen could work for identifying citrus greening-resistant varieties. We will continue to germinate gamma ray-irradiated Ray Ruby grapefruit seeds in soil and inoculate the seedlings with psyllids carrying greening bacteria. We have been watching the development of greening symptoms on the seedlings.



Engineering Resistance Against Citrus Canker and Greening Using Candidate Genes

Report Date: 04/15/2012   Project: 202

Engineering Resistance Against Citrus Canker and Greening Using Candidate Genes

Report Date: 04/15/2012
Project: 202
Category: Horticultural & Management
Author: Wen-Yuan Song
Sponsor: Citrus Research and Development Foundation

The objectives of this project include: (1) Characterization of the transgenic citrus plants for resistance to canker and greening; (2) Examination of changes in host gene expression in the NPR1 overexpression lines in response to canker or greening inoculations; (3) Examination of changes of hormones in the NPR1 overexpression lines in response to canker or greening inoculations; (4) Overexpression of AtNPR1 and CtNPR1 in citrus by using a phloem-specific promoter. We searched the citrus genome database (http://www.phytozome.org/citrus.php) with BLAST and identified nine genes similar to AtNPR1 or its Arabidopsis homologs. Among them, CtNPR1 (also named CtNH1) is the most closely-related to AtNPR1 based on phylogenetic analysis, supporting an orthologous relationship. The Figwort mosaic virus (FMV) promoter was used to overexpress CtNH1 in citrus. Previous studies in soybean showed that the FMV promoter is significantly stronger than the Cauliflower mosaic virus (CaMV) 35S promoter for gene expression (MPMI 21: 1027). Three lines, CtNH1-1, CtNH1-3, and CtNH1-5, which showed normal growth phenotypes, but high levels of CtNH1 transcripts have been identified. When inoculated with X. citri subsp. citri (Xcc), they all developed significantly less severe canker symptoms as compared with the ‘Duncan’ grapefruit plants. To confirm resistance, we carried out growth curve analysis. Consistent with the lesion development data, as early as 7 days after inoculation (DAI), there is a differential Xac population in the infiltrated leaves between CtNH1-1 and ‘Duncan’ grapefruit. At 19 DAI, the level of Xcc in CtNH1-1 plants is 104 fold lower than that in ‘Duncan’ grapefruit. These results indicate that overexpression of CtNH1 results in a high level of resistance to citrus canker. CtNH1 plants have been propagated by grafting and are inoculating with Candidatus Liberibacter asiaticus (Las) in two laboratories. A microarray experiment was conducted using CtNH1 and non-transgenic Duncan grapefruit inoculated with Xcc. A needleless syringe was used to infiltrate the leaves with the bacterial culture (OD600 to 0.3). Three time points were used for this study. For each time point, three replications were used. Data analysis indicates that at p value <0.01, a total of 451, 725, and 2144 genes were differentially expressed at 6, 48, and 120 hours post inoculation (HPI), respectively. Using the visualization tool Mapman 3.5.1, the differentially regulated genes (Log FC ' 1 and Log FC ' -1) were mapped to give an overview of the pathways affected. Interestingly, at 120 HPI, a large number of genes involved in protein degradation and post-translational modification were differentially regulated. Furthermore, numerous genes involved in signaling also showed differential expression at this time. The results indicate that a large number of genes involved in the regulation of transcription were up-regulated in the transgenic plants at 120 HPI, and also at 48 HPI, although to a lesser extent. The photosynthetic pathway was affected to a larger extent at 48 HPI, which is signified by a large number of genes involved in photosynthesis being up-regulated in the transgenic plant when compared to the non-transgenic citrus. We have completed the SUC2::CtNH1 construct, in which CtNH1 is driven by a phloem-specific promoter from the Arabidopsis SUC2 gene. The construct were transformed into 'Duncan' grapefruit. To date, ten transgenic lines have been obtained. They are ready for Las inoculation.



Engineering citrus for resistance to Liberibacter and other phloem pathogens

Report Date: 04/12/2012   Project: 79026

Engineering citrus for resistance to Liberibacter and other phloem pathogens

Report Date: 04/12/2012
Project: 79026
Category: Horticultural & Management
Author: William Gurley
Sponsor: Citrus Research and Development Foundation

We now have citrus transformants in the greenhouse at UF for all of our constructs. PCR confirmations for all plants have been completed and indicate that from 17 to 88% of the surviving plants are positive for the R gene constructs. The least successful was the snc1 constitutive mutant expressed using the AtSUC2 promoter (2 positives out of 12 total). In addition, we have 11 (out of 15) citrus transformants containing the GusPlus reporter expressed using the AtPAD4 promoter, which we have recently found to be inducible by psyllid feeding. Our working hypothesis is that restricting expression of the R proteins to the phloem will lessen the negative impact that these proteins may have on normal growth and development. Transgenic citrus plants expressing either SNC1 or SSI4 wild type proteins using the phloem-specific AtSUC2 promoter appeared to exhibit a normal growth and leaf phenotype. This result was predicted since the respective R proteins should not have been activated in the absence of pathogens, and hence, would not trigger the hypersensitive response. In contrast, however, expression of the constitutively-active ssi4 protein in a phloem-specific manner resulted in approximately 60% of the plants with an obvious negative phenotype consisting of yellowish leaves, wavy-edged leaves, reduced internodal lengths, general stunting and leaf drop. This stunted phenotype resulted in death for 6 out of the 15 original transformants (40%). Although phloem-specific expression of the ssi4 mutant protein often (60% of the plants) resulted in either death or a negative growth phenotype, phloem expression of the snc1 mutant protein produced no abnormal phenotype. However, only 2 out of 12 plants were confirmed transgenics (AtSUC2/snc1). A similar tendency for the ssi4 mutant protein constructs to show an abnormal phenotype was also seen when expressed using the wound-inducible AtPAD4 promoter. The AtPAD4 promoter-snc1 construct showed no unusual phenotype. There are two questions that remain unresolved: 1) Why are some transformants showing a negative growth phenotype and others not, and 2) Do any of the R protein constructs confer resistance to Liberibacter? We are planning experiments that will evaluate the survival of Liberibacter in our transformed citrus lines. In addition, psyllid feeding tracks are being characterized histochemically to determine the relationship between AtPAD4/GusPlus reporter expression and the location of stylet sheaths and callose induction.



Engineering citrus for resistance to Liberibacter and other phloem pathogens

Report Date: 04/12/2012   Project: 79026

Engineering citrus for resistance to Liberibacter and other phloem pathogens

Report Date: 04/12/2012
Project: 79026
Category: Horticultural & Management
Author: William Gurley
Sponsor: Citrus Research and Development Foundation

Analysis of transgenic citrus lines: We confirmed the presence of transgenes in transformed citrus plants using standard PCR techniques. In one line, SUC2-snc1 mutant (20-7), it was unusually difficult to establish that the desired construct was present. It required serial dilutions of genomic templates to reduce interference of the inhibitory substances present in plant genomic DNA extracts. This interference seemed to be correlated with the presence of this specific construct. It is possible that constitutively expressed snc1 mutant may affect the production of phenolic or other interfering compounds. In order to evaluate the survival of Liberibacter asiaticus (Las) in our transformed citrus lines, we first focused on the development of an assay to detect the presence of the bacteria in heavily infected, symptomatic citrus leaves. These were obtained from the UF Lake Alfred laboratory of Dr. William Dawson. Citrus leaves were sectioned into midveins and blades in order to determine the distribution of the infecting pathogen. Original quantities of tested materials were in the range of 40 mg. The primers used for PCR detection of the Liberibacter asiaticus were based on 16S ribosomal DNA, and as plant controls, the cytochrome oxidase COX gene was used (Pelz-Stelinski et al., 2010, J. Econ. Entomol. 103, 1531-1541). We were able to detect Las and Cox amplicons in genomic DNA isolates from these relatively small quantities of transgenic citrus leaf material: either in green (asymptomatic) or yellow symptomatic Las-infected leaves. Setting up a calibrated curve for real time quantitative PCR: Next, we generated Las and Cox PCR amplicons to be used in specific standard curves in the real-time PCR reactions to determine copy numbers of respective genes. The Wingless (Wg) gene that serves as the psyllid control was obtained from the genomic DNA isolated from 10 uninfected psyllids. Real-time PCR reactions required testing multiple variables in order to fine-tune the Las-detection assay, some being the primer and amplicon concentrations. We tested a range of amplicon concentrations from 10 ng to 1 pg (=12,190,283 copies), and in later experiments, down to 12 copies of Las, 14 copies of Cox and Wg. Also, lower concentrations of PCR primers were more optimal. As a starting point, we tested the expression of AtPAD4-GUSplus transgenic plants responsive to wounding to correlate the wounding event itself with the actual psyllid feeding. Preliminary citrus wounding experiments by slit-cutting, or needle-puncturing determined that the AtPAD4 promoter was very specifically induced by wounding. We performed numerous histochemical studies, including aniline blue, acid fuchsin, toluidine blue, Evans blue as individual and with combined staining, and fluorescence techniques to detect psyllid stylet sheaths. These were performed on cross-sections identified by GUS staining spots generated in response to psyllid-feeding (=wounding). After numerous attempts we were unable to establish this technology as a useful tool to meet our overall goal of the early Liberibacter detection in citrus plants.



Evaluation of a Three-Lure (TML, ME, RK = TMR) Detection Trap against Medfly, Oriental Fruit Fly and Melon Fly

Report Date: 04/12/2012   Project: CRB Project No. 5500-193   Year: 2013

Evaluation of a Three-Lure (TML, ME, RK = TMR) Detection Trap against Medfly, Oriental Fruit Fly and Melon Fly

Report Date: 04/12/2012
Project: CRB Project No. 5500-193   Year: 2013
Category: ACP Vector
Author: Roger Vargas
Sponsor: California Citrus Research Board

New outbreaks of invasive fruit flies (Diptera: Tephritidae) continue to threaten agriculture world-wide. Establishment of these pests often results in serious economic and environmental consequences associated with quarantine, control, and eradication programs. Early fruit fly detection and eradication in the United States requires deployment of large numbers of traps baited with the highly attractive male specific parapheromone lures trimedlure (TML), cue-lure (C-L), and methyl eugenol (ME) to detect such pests as Mediterranean fruit fly, Ceratitis capitata (Wiedemann), melon fly, Bactrocera cucurbitae (Coquillett), and oriental fruit fly, B. dorsalis (Hendel), respectively. The current study compared the performance of solid single lure cones and plugs in conjunction with DDVP insecticidal strips; liquid lure with naled formulations; and single, double, and triple solid lure wafers impregnated with insecticide. Treatments were placed in AWPM and Jackson traps under Hawaiian climatic conditions in habitats where B. dorsalis, C. capitata, and B. cucurbitae occur together. The overall goal of this study was to develop a more convenient, effective, and safer means to use male lures and insecticides for improved detection and male annihilation of invasive fruit flies. In survey trials near Kona, HI captures of C. capitata, B. cucurbitae, and B. dorsalis with Mallet TMR wafers were equal to those for the standard TML, ME, and C-L traps used in Florida and California. A solid Mallet TMR wafer is more convenient to handle, safer, and may be used in place of several individual lure and trap systems, potentially reducing costs of large survey and detection programs in Florida and California, and male annihilation programs in Hawaii. Trials of the new TMR wafers have now moved to evaluations in typical citrus growing areas of California. Mallet TMR dispensers are being weathered inside Jackson traps in citrus trees in Tulare, Ventura, Riverside, Kern, and Orange Counties of California. Two series of trials are being conducted in conditions representative of summer (August-September) and winter (January-March) conditions in California. Each week weathered wafers are sent to Kauai Island, HI or Hawaii Island, HI (USDA-ARS-PBARC) for fruit fly bioassays and to Farma Tech International, North Bend, Washington for chemical analysis using conventional gas liquid chromatography methods. Currently, approximately 30,000 sets of TML, ME, and C-L traps are maintained throughout the state. From a worker safety, convenience, and economic standpoint, Farma Tech TMR Mallet solid wafers with DDVP may be more cost effective, convenient, and safer to handle than current liquid lure and insecticide formulations (e.g. naled) used for detection programs for TML, ME and C-L responding flies in California. Cost/benefit analyses of Mallet TMR vs. standard trapping systems will be done.



Characterization of the virulence mechanism of the citrus Huanglongbing pathogen Candidatus Liberibacter asiaticus

Report Date: 04/11/2012   Project: 232

Characterization of the virulence mechanism of the citrus Huanglongbing pathogen Candidatus Liberibacter asiaticus

Report Date: 04/11/2012
Project: 232
Category: Horticultural & Management
Author: Nian Wang
Sponsor: Citrus Research and Development Foundation

Transcriptional analyses of citrus stem, root, and leaf responses to Candidatus Liberibacter asiaticus infection Candidatus Liberibacter asiaticus is known to cause Huanglongbing disease, which is currently the most destructive disease that affects citrus plants. Previous studies indicate that Ca. L. asiaticus is distributed in bark tissue, leaf midrib, roots, and different floral and fruit parts, but not in endosperm and embryo, of infected citrus trees. The leaves, stems, and roots play distinct roles in the photosynthesis and transportation of water, nutrients, etc. However, the effects of Ca. L. asiaticus on gene expression in the stems and roots remain to be elucidated despite the recent progress that has been made toward understanding the transcriptome of leaves that are infected with Ca. L. asiaticus. Dramatic differences were observed in the transcriptional responses in the citrus leaves, stems, and roots to Ca. L. asiaticus infection. Overall, 1909, 884, and 111 genes were regulated in leaves, stems, and roots, respectively, by Ca. L. asiaticus infection. Only 2 genes overlapped in the leaves, stems and roots, whereas 289 genes were regulated in both the leaves and stems, 16 in the leaves and roots, and 6 in the roots and stems. The low similarities among the leaf, stem and root expression profiles indicate that Ca. L. asiaticus affects them all differently. Further analyses showed that Ca. L. asiaticus reprograms multiple cellular and metabolic processes in citrus and identified genes whose expression are regulated in organ-specific manners. Broad variations in expression levels were detected for genes that are involved in carbohydrate metabolism, cell wall biogenesis, lipid metabolism, hormone signaling, secondary metabolism, transportation, amino acid metabolism, and signaling and transcriptional regulation. Our analysis has revealed that Ca. L. asiaticus reprograms multiple metabolic and cellular processes in citrus and has identified genes whose expression are regulated in an organ-specific manner. Most of the genes were regulated in the leaves, followed by the stems and the least were observed in the roots. The genes that showed significantly altered expression between the organs were very different in each of the three organs, indicating organ specialization in response to Ca. L. asiaticus, which affects their distinct functions. Microscopy analysis has been conducted to compare the lignin, and anatomic changes in the stems and roots of HLB positive trees and healthy trees. In order to understand how seasonal variation affects the molecular response of citrus to infection by Ca. L. asiaticus, we conducted transcriptional analyses of infected sweet orange in Florida in June where temperatures are high (Summer) and in November where temperatures are relatively lower (Fall). With P value ‘0.05 and log2 fold change (LFC) of >1.0 or < -1.0 as cutoff thresholds, significantly altered gene expression was recorded for 2012 genes in Fall, and 1399 in summer. Of these, 1031 and 751 were up-regulated, while 981 and 648 were down-regulated in Fall and summer samples, respectively. A total of 330 genes were regulated under both growth conditions, out of which 214 were up-regulated, and 116 were repressed in the Fall, while 78 were up-regulated, and 252 were repressed in summer. At least 1682 genes were regulated only in Fall, while 1069 were affected in the summer. Ca. L. asiaticus regulated citrus genes were mapped into 29 out of 34 pathways/processes represented in the MapMan system. In both environmental conditions, Ca. L. asiaticus infection most significantly regulated genes corresponding to the following gene groups including hormone metabolism and response, transportation, signaling, photosynthesis, secondary metabolism, biotic and abiotic stress, development, lipid metabolism, carbohydrate metabolism, redox, and amino acid metabolism.



Production of Transgenic Commercial Cultivars Resistant to HLB and Canker

Report Date: 04/11/2012   Project: 221

Production of Transgenic Commercial Cultivars Resistant to HLB and Canker

Report Date: 04/11/2012
Project: 221
Category: Horticultural & Management
Author: Ed Stover
Sponsor: Citrus Research and Development Foundation

A series of transgenics, produced in the last several years, continue to move forward in the testing pipeline. Currently, it appears prudent to replicate plants of each transgenic event and conduct challenges that last 10-14 months. Most of these plants in our program have been transformed with AMPs driven by several constitutive and vascular specific promoters. Several D4E1 lines appear to grow substantially better than controls even when infected, but do show the presence of CLas. Initial hopes of quickly identifying truly immune transgenics have matured to current efforts focusing on identifying significant resistance. For a disease that is devastating many Florida citrus groves, it is surprisingly difficult to get a consistent high-level of HLB disease even using known susceptible plants and inoculum sources with high levels of CLas. APHIS funded a grant, written by Gloria Moore, Ed Stover and Bob Shatters, focusing on identifying methods for highly-efficient and more standardized resistance screening, including exploration of strain x genotype effects. At the request of CRDF most FL researchers conducting research examining HLB-resistance met and shared observations and information. These data were summarized and used to finalize a set of experiments which are now underway. Jude Grosser and Ron Brlansky are playing key roles in addition to the grant authors. In our program, new constructs and resulting transgenics are in process, including hairpins to suppress PP-2 through RNAi (to test possible reduction in vascular blockage even when CLas is present), chimeral constructs that should enhance AMP effectiveness (designed by Goutam Gupta of Los Alamos National Lab), and a citrus promoter driving citrus defensins (designed by Bill Belknap of USDA/ARS, Albany, CA).



A secure site for testing transgenic and conventional citrus for HLB and psyllid resistance

Report Date: 04/11/2012   Project: 220

A secure site for testing transgenic and conventional citrus for HLB and psyllid resistance

Report Date: 04/11/2012
Project: 220
Category: Horticultural & Management
Author: Ed Stover
Sponsor: Citrus Research and Development Foundation

A transgenic test site has been prepared at the USDA/ARS USHRL Picos Farm in Ft. Pierce, to support HLB/ACP/Citrus Canker resistance screening for the citrus research community. There are numerous experiments in place at this site where HLB, ACP, and citrus canker are widespread. The first trees have been in place for more than twenty-one months. Dr. Jude Grosser of UF has provided 550 transgenic citrus plants expressing genes expected to provide HLB/canker resistance, which have been planted in the test site. Dr. Grosser planted an additional 89 trees including preinoculated trees of sweet orange on a complex tetraploid rootstock that appeared to confer HLB resistance in an earlier test. USHRL has a permit approved from APHIS to conduct field trials of their transgenic plants at this site, with several hundred transgenic rootstocks in place: Dr. Kim Bowman has planted several hundred rootstock genotypes transformed with the antimicrobial peptide D4E1. An MTA is in place to permit planting of Texas A&M defensin transgenics produced by Erik Mirkov and his trees expressing the snow-drop Lectin (to suppress ACP) are now on the Stover permit. Information has been provided to complete the permit application by Eliezer Louzada of Texas A&M to plant his transgenics which have altered Ca metabolism to target canker, HLB and other diseases. More than 120 citranges, from a well-characterized mapping population, and other trifoliate hybrids (+ sweet orange standards) have been planted in a replicated trial in collaboration with Fred Gmitter of UF and Mikeal Roose of UCRiverside. Plants will be monitored for CLas development and HLB symptoms. Data from this trial should provide information on markers and perhaps genes associated with HLB resistance, for use in transgenic and conventional breeding. Additional plantings are welcome from the research community.



How the efficiency of HLB transmission by psyllids varies depending on the stage of infection and plant development

Report Date: 04/05/2012  

How the efficiency of HLB transmission by psyllids varies depending on the stage of infection and plant development

Report Date: 04/05/2012
Category: Horticultural & Management
Author: Svetlana Folimonova
Sponsor: Citrus Research and Development Foundation

The first objective of this proposal is to examine initiation of HLB infection after psyllid inoculation to investigate how introduction of the pathogenic bacterium into different types of flushes of a tree affects establishment of infection. For this purpose, we have been setting a number of trials using sweet orange plants that have young growing flushes and plants that have only matured flushes. These plants have been exposed to HLB-infected psyllids. Leaves on which psyllids fed were analyzed by PCR to see if the HLB bacterium could be detected soon after the exposure of leaves to infected psyllids. As a result in this experiment, we were able to detect presence of the bacterium fairly early after the initial exposure. Plants exposed to infected psyllids have been transferred to greenhouse and further monitored for the development of infection. Currently we are in a process of analyzing and comparing infection rates of plants with young flushes versus plants with only matured flushes. Our next objective is to characterize potential inoculum sources of the bacterium available for psyllids within an infected tree by examining presence of viable bacterium in different types of flushes that are produced during the development of the disease after psyllid-mediated inoculation of a tree and evaluating the proportion of psyllids that acquired the bacterium after their exposure to different types of flushes during infection development and their ability to transmit infection to new trees. We conducted several trials in which healthy psyllids were placed on either a young growing flush or an older symptomatic flush of an infected tree. Psyllids were secured on those flushes by using small traps made up of mesh material and after 21 days psyllids were analyzed by PCR with HLB-specific primers. Data from PCR analyses demonstrated that Las-positive psyllids were collected from both types of flushes. Psyllids that acquired bacteria from different flushes were next transferred onto healthy receptor plants. These plants are being monitored for the development of infection. Currently we are analyzing numbers of plants that became infected upon inoculation with psyllids fed on different types of flushes. Another goal is to understand whether the HLB bacterium can have different forms or can be present at different stages in different types of tissues. One of the approaches that are being undertaken is to compare levels of the HLB bacterium genes expression in old symptomatic and young pre-symptomatic flushes. This work is ongoing. The third objective is to examine psyllid transmission rates from and to citrus varieties that are highly tolerant to HLB. We have propagated 6 different varieties of citrus: Valencia sweet orange, Duncan grapefruit, Persian lime, Eureka lemon, Carrizo citrange, and Poncirus trifoliata. Those varieties represent plants with different degrees of susceptibility to HLB. Currently these plants are being exposed to HLB-infected psyllids. After 1-month exposure, plants will be moved to greenhouse and monitored for the development of HLB infection. Infection rates for these varieties will be analyzed and compared. Later infected plants will be used as inoculum donors to examine psyllid transmission to new plants.